PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.4G293800.1.p
Organism
Setaria viridis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 262aa    MW: 28210.7 Da    PI: 6.5576
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.4G293800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.31.6e-0893137852
                         HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                         +r   NR A r++R++Kka ++ Lee+v  L a N++L k+l++ 
  Sevir.4G293800.1.p  93 KRPSGNRAAVRKYREKKKAHTASLEEEVVHLRALNQQLMKKLQNH 137
                         55566**********************************999874 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-884153IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.4E-1384154No hitNo description
PfamPF077161.3E-1489143IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.97E-890137No hitNo description
CDDcd146863.74E-1298145No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071294Biological Processcellular response to zinc ion
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MDDGDLDFSN PDTFLCPAIG NDPPSSCSMD SYFDDILKDT EHHACTHTHT CNPPVHDHSH  60
THTCVHVHTK IVAASPDAAE TAESPSENNA SKKRPSGNRA AVRKYREKKK AHTASLEEEV  120
VHLRALNQQL MKKLQNHAAL EAEVARLRCL LVDIRGRIEG EIGAFPYQRP VKNIDLVSSV  180
DQGSFLGGAQ VTNSCDFRCN DQMYCNPGMQ GAMNAQVLGQ GACDIANIQC MGSAKSGSTK  240
LPVCGGMDTV PAGCLPNVEK K*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004966469.10.0PREDICTED: putative transcription factor kapC
SwissprotQ8VY763e-78BZP19_ARATH; Basic leucine zipper 19
TrEMBLK3XYU90.0K3XYU9_SETIT; Uncharacterized protein
STRINGSi007107m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP41753572
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35040.13e-59bZIP family protein